PoplarV1, Main, Exploration, bibRecord, 002468

The SUPERMAN gene family in Populus: nucleotide diversity and gene expression in a dioecious plant.

Identifieur interne : 002468 ( Main/Exploration ); précédent : 002467; suivant : 002469

The SUPERMAN gene family in Populus: nucleotide diversity and gene expression in a dioecious plant.

Auteurs : Yuepeng Song [République populaire de Chine] ; Kaifeng Ma ; Dong Ci ; Xueyuan Tian ; Zhiyi Zhang ; Deqiang Zhang

Source :

Plant cell reports [ 1432-203X ] ; 2013.

RBID : pubmed:23588495

Descripteurs français

English descriptors

KwdEn :
- Climate (MeSH), Codon (genetics), Flowers (genetics), Gene Expression Profiling (MeSH), Gene Expression Regulation, Developmental (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (genetics), Genetic Variation (MeSH), Molecular Sequence Data (MeSH), Multigene Family (MeSH), Mutation (genetics), Nucleotides (genetics), Phylogeny (MeSH), Plant Growth Regulators (metabolism), Plant Proteins (genetics), Plant Proteins (metabolism), Polymorphism, Single Nucleotide (genetics), Populus (genetics), Populus (growth & development), RNA, Messenger (genetics), RNA, Messenger (metabolism), Signal Transduction (MeSH), Species Specificity (MeSH).
MESH :
- chemical , genetics : Codon, Nucleotides, Plant Proteins, RNA, Messenger.
- genetics : Flowers, Genes, Plant, Mutation, Polymorphism, Single Nucleotide, Populus.
- growth & development : Populus.
- chemical , metabolism : Plant Growth Regulators, Plant Proteins, RNA, Messenger.
- Climate, Gene Expression Profiling, Gene Expression Regulation, Developmental, Gene Expression Regulation, Plant, Genetic Variation, Molecular Sequence Data, Multigene Family, Phylogeny, Signal Transduction, Species Specificity.

Abstract

KEY MESSAGES

SUP gene family expression and regulation patterns reported in dioecious woody plant. Phylogenetic and nucleotide diversity analysis indicated PtoSUP1 is highly conserved and has undergone strong purifying selection. The molecular basis of SUPERMAN (SUP) regulation during floral development in monoecious plants has been extensively studied, but little is known of the SUP gene family in dioecious woody plants. In this study, we systematically examined the diversification of the SUP gene family in Populus, integrating genomic organization, expression, and phylogeny data. SUP family members showed sex-specific expression throughout flower development. Transcript profiling of rare gynomonoecious poplar flowers revealed that a significant reduction in PtoSUP1 mRNA might be important for stamen development in gynomonoecious poplar flowers. We found that the coding regions of Populus SUP genes are very highly conserved and that synonymous sites in exon regions have undergone strong purifying selection during SUP evolution in Populus. These results indicate that SUP genes play an important role in floral development of dioecious plants. Expression analysis of SUP suggested possible regulatory mechanisms for gynomonoecious poplar flower development. These findings provide an important insight into the mechanisms of the evolution of SUP function and may help enable engineered regulation of flower development for breeding improved tree varieties.

DOI: 10.1007/s00299-013-1442-1
PubMed: 23588495

Affiliations:

République populaire de Chine

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Le document en format XML

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<term>Gene Expression Regulation, Developmental (MeSH)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Genes, Plant (genetics)</term>
<term>Genetic Variation (MeSH)</term>
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<term>Plant Growth Regulators (metabolism)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
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<term>Populus (genetics)</term>
<term>Populus (growth & development)</term>
<term>RNA, Messenger (genetics)</term>
<term>RNA, Messenger (metabolism)</term>
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<term>Données de séquences moléculaires (MeSH)</term>
<term>Facteur de croissance végétal (métabolisme)</term>
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<term>Fleurs (génétique)</term>
<term>Gènes de plante (génétique)</term>
<term>Mutation (génétique)</term>
<term>Nucléotides (génétique)</term>
<term>Phylogenèse (MeSH)</term>
<term>Polymorphisme de nucléotide simple (génétique)</term>
<term>Populus (croissance et développement)</term>
<term>Populus (génétique)</term>
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<term>Transduction du signal (MeSH)</term>
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<term>Plant Proteins</term>
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<term>Mutation</term>
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<term>Fleurs</term>
<term>Gènes de plante</term>
<term>Mutation</term>
<term>Nucléotides</term>
<term>Polymorphisme de nucléotide simple</term>
<term>Populus</term>
<term>Protéines végétales</term>
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<front><div type="abstract" xml:lang="en"><p><b>KEY MESSAGES</b>
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<p>SUP gene family expression and regulation patterns reported in dioecious woody plant. Phylogenetic and nucleotide diversity analysis indicated PtoSUP1 is highly conserved and has undergone strong purifying selection. The molecular basis of SUPERMAN (SUP) regulation during floral development in monoecious plants has been extensively studied, but little is known of the SUP gene family in dioecious woody plants. In this study, we systematically examined the diversification of the SUP gene family in Populus, integrating genomic organization, expression, and phylogeny data. SUP family members showed sex-specific expression throughout flower development. Transcript profiling of rare gynomonoecious poplar flowers revealed that a significant reduction in PtoSUP1 mRNA might be important for stamen development in gynomonoecious poplar flowers. We found that the coding regions of Populus SUP genes are very highly conserved and that synonymous sites in exon regions have undergone strong purifying selection during SUP evolution in Populus. These results indicate that SUP genes play an important role in floral development of dioecious plants. Expression analysis of SUP suggested possible regulatory mechanisms for gynomonoecious poplar flower development. These findings provide an important insight into the mechanisms of the evolution of SUP function and may help enable engineered regulation of flower development for breeding improved tree varieties.</p>
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<affiliations><list><country><li>République populaire de Chine</li>
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<name sortKey="Zhang, Deqiang" sort="Zhang, Deqiang" uniqKey="Zhang D" first="Deqiang" last="Zhang">Deqiang Zhang</name>
<name sortKey="Zhang, Zhiyi" sort="Zhang, Zhiyi" uniqKey="Zhang Z" first="Zhiyi" last="Zhang">Zhiyi Zhang</name>
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The SUPERMAN gene family in Populus: nucleotide diversity and gene expression in a dioecious plant.

The SUPERMAN gene family in Populus: nucleotide diversity and gene expression in a dioecious plant.

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